Return

Adenovirus F40/F41, DNA, Real-Time PCR (Stool)

Code:6015

Synonyms
Аденовирус, серотипы F40/F41 [полимеразная цепная реакция в режиме реального времени].AdVAdenovirus F40/F41 DNA, real-time PCRAdenovirus serotypes F40/F41Enteric adenovirusGroup F adenovirusHAdV

Analysis details

Methodology

  • Real-time polymerase chain reaction (RT-PCR)

Expected Turnaround Time

1 day

Special Instructions

  • No specific patient preparation is required.

How to use

The Adenovirus F40/F41, DNA, Real-Time PCR (Stool) test detects human adenovirus (HAdV) group F serotypes 40/41 in stool to aid in diagnosing adenoviral gastroenteritis. This molecular assay targets enteric adenovirus DNA and is used in conjunction with clinical assessment and other laboratory studies; it is not designed for monitoring treatment response or clearance.

Limitations

Human adenoviruses are nonenveloped DNA viruses in the family Adenoviridae. More than 68 serotypes are organized into seven species (A–G) and are linked to diverse syndromes, including acute respiratory illness, conjunctivitis, hemorrhagic cystitis, and gastroenteritis. Adenovirus accounts for approximately 4%–12% of viral gastroenteritis cases and ranks second to rotavirus. Disease occurs most often in children younger than two years, though adolescents and adults may be affected; severe manifestations can develop in immunocompromised individuals (eg, after stem cell transplantation or with AIDS). Clinical disease correlates with serotype. The enteric types F40 and F41 are associated with gastroenteritis, whereas other serotypes such as C1 and B7 are typically linked to respiratory disease. Diagnostic approaches include electron microscopy (broad detection but limited sensitivity), viral culture (slow and particularly challenging for F40/F41), antigen detection by immunoassay or latex agglutination (rapid and specific but less sensitive), and nucleic acid–based methods. Real-time PCR performed on stool provides high analytical sensitivity and specificity for adenoviral DNA when primers target serotypes F40/F41. Quantitative formats can estimate viral load for epidemiologic applications. Limitations include persistence of detectable nucleic acid after effective therapy, making the assay unsuitable for treatment monitoring. Sensitivity is greatest when specimens are collected before initiation of antiviral therapy. Results require interpretation in the context of clinical findings and adjunct laboratory data.

Reference interval
IndicationsAcute gastroenteritis characterized by vomiting, diarrhea, abdominal cramping, and fever, Evaluation of suspected enteric adenovirus infection in infants and toddlers younger than 2 years

Possible Causes of Abnormal Results

Decreased levels

  • cidofovir
  • ribavirin

Specimen Requirements

SpecimenStool
ContainerSterile Stool Container

References

Logan C, O'Leary JJ, O'Sullivan N. Real-time reverse transcription-PCR for detection of rotavirus and adenovirus as causative agents of acute viral gastroenteritis in children. J Clin Microbiol. 2006 Sep;44(9):3189-95.

Jothikumar N, Cromeans TL, Hill VR, Lu X, Sobsey MD, Erdman DD. Quantitative real-time PCR assays for detection of human adenoviruses and identification of serotypes 40 and 41. Appl Environ Microbiol. 2005 Jun;71(6):3131–6.

Sriwanna P, Chieochansin T, Vuthitanachot C, Vuthitanachot V, Theamboonlers A, Poovorawan Y. Molecular characterization of human adenovirus infection in Thailand, 2009-2012. Virol J. 2013 Jun 13;10:193. doi: 10.1186/1743-422X-10-193.

Ebner K, Rauch M, Preuner S, Lion T. Typing of human adenoviruses in specimens from immunosuppressed patients by PCR-fragment length analysis and real-time quantitative PCR. J Clin Microbiol. 2006 Aug;44(8):2808-15.